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Problem with GromacsVersionError: Gromacs version should be 5.1.2 or newer 0 detected
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23
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351
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October 2, 2023
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Problem running gromacs simulation
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27
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236
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November 14, 2023
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Challenges in Reproducing ddG Estimation Results for 1STN
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27
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193
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April 19, 2024
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Protein-glycan docking
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14
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216
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September 29, 2023
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Active-passive-to-ambig.py
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15
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199
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May 26, 2023
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PRODIGY Error running my PDB file containing my docked proteins from ClusPro
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15
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167
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August 10, 2023
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Problem with the CNS executable
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9
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189
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June 5, 2023
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Local HADDOCK3 missing ligands
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9
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242
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May 26, 2023
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Error when running all my haddocks after server shutdown error
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13
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164
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August 7, 2023
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Water Refinement HADDOCK 2.4
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9
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203
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June 28, 2023
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Profit:: Too many arguments
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11
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148
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June 8, 2023
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Issues when docking glycans
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9
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182
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September 22, 2023
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Haddock submission homodimer + 2 testo + 2 NAD ligands - doubts
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10
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124
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December 12, 2023
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Find NOE violations
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14
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84
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February 14, 2024
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How to interpret HADDOCK Result?
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1
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355
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November 23, 2023
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Local HADDOCK3 errors
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8
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240
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May 23, 2023
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Covalent docking as mimic of protein engineering
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5
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150
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May 26, 2023
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Absolute Binding Free Energy with pmx
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5
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297
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May 24, 2023
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How to generate HADDOCK restraints TBL file
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4
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267
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May 1, 2023
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Pmx ligandHybrid list index out of range error
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4
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285
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July 19, 2023
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Ab-initio warning
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8
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170
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June 22, 2023
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Haddock3 and slurm
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5
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174
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May 29, 2023
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PMX protein mutation tutorial
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6
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142
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November 10, 2023
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Ab-initio protocol
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6
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154
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May 24, 2023
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HADDOCK2.4 - Local installation - Exec format error
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4
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174
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September 3, 2023
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The number of partitions (ncvpart) for random removal of restraints must be an integer!
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7
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184
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June 9, 2023
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Ligand submission problem/covalent docking
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2
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208
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June 23, 2023
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Help Needed with Protein-Ligand Topology in pmx Tutorial
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4
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183
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October 13, 2023
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Tutorial for protein-dna/rna docking
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4
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157
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September 20, 2023
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Whiscy usage doubts
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4
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176
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September 19, 2023
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Metrics for the Evaluation of Docking Model Quality
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6
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146
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May 2, 2023
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DisVis Internal Server Error
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4
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175
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June 7, 2023
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Capping residues
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7
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127
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August 7, 2023
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HADDOCK Zinc finger protein
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6
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141
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June 14, 2023
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Docking 3 molecules using webserver
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5
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139
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August 7, 2023
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CNS library issue on compute cluster
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5
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134
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July 31, 2023
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PRODRG Help Needed
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5
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153
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May 10, 2023
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Water refinement HADDOCK2.2: data interpretation
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3
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157
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August 31, 2023
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Prodigy Error: Radius array is <= 0 for the residue: ILE ,atom: CD
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2
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185
|
June 12, 2023
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Analysis energies
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7
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101
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February 18, 2024
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Cport issue on large protein
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4
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154
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May 4, 2023
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Is it possible only to get Haddock scores from my docked complex without running docking?
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4
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137
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February 12, 2024
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Proper use of Ambiguous and Unambiguous restraints in protein-peptide docking
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7
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106
|
February 21, 2024
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BioBB not working?
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3
|
150
|
January 12, 2024
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Active Residues (Protein-protein Docking)
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3
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148
|
January 19, 2024
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Issue with pdb2gmx and charm36mut forcefield: Undefined Atom Type "OH"
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4
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142
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December 7, 2023
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Error in PDB file. Unknown error: invalid literal for int() with base 10: '2+'
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5
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144
|
May 8, 2023
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Problem with protein-ligand
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2
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165
|
September 20, 2023
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Preparing small molecules for docking
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4
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146
|
August 18, 2023
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Explicit membrane
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3
|
159
|
June 12, 2023
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