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Welcome to ask.bioexcel.eu
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1
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2127
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March 23, 2016
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Problems with queued dockings
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2
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21
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May 14, 2026
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Saving docked files
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1
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10
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May 6, 2026
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NOE constrains C-C vs H-H
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0
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7
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April 27, 2026
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advanced settings
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1
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20
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April 26, 2026
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Visual Artifacts in PyMOL Following GROMACS Trajectory Post-Processing
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0
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10
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April 23, 2026
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Problem work submission
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2
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24
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March 29, 2026
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Error installing haddock3
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3
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17
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March 23, 2026
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Molecular dynamics parameters (.mdp options)
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0
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10
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March 22, 2026
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Introduction: Marc El Hasbany
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0
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16
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March 19, 2026
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Mutant Complex Not Launching in HADDOCK (Wild Type Works Fine)
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1
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9
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February 11, 2026
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Issue with submission of Haddock run
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1
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13
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February 10, 2026
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ARCTIC-3d is not working
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3
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16
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February 5, 2026
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Modified amino acid
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0
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14
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January 28, 2026
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Ligand conformer generator
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7
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56
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January 6, 2026
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Suitable tool for docking stapled peptide and protein
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1
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25
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December 10, 2025
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Need to dock 1000 peptide for one protein in HPC. Is there is any way to do that in one job?
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5
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69
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December 8, 2025
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Z-score is zero
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2
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33
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November 19, 2025
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Unusual bonds in -OSO3 of ligand after docking
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3
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39
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November 14, 2025
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TIP in my pdb file
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2
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37
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November 9, 2025
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Haddock Queued for a long time
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0
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18
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November 3, 2025
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Docking with protein embedded in a bacterial membrane
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1
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37
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October 31, 2025
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Investigating the effect of point mutation in the binding affinity of my protein with a ligand
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6
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59
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October 3, 2025
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New User Question- HADDOCK
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39
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616
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September 18, 2025
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Parameter file lost
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1
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14
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September 7, 2025
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RMSD of docked proteins vs co-crystallized structure from PDB
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4
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97
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September 3, 2025
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Error in the topology generation: prot_psf_mol2 could not be created on HPC
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13
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78
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August 19, 2025
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PS-HomPPI v2.0 - server error
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0
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24
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June 20, 2025
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ERROR_Active residue prediction
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0
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24
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June 2, 2025
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Fix multiple occupancies or insertions
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2
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44
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April 4, 2025
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