|
Welcome to ask.bioexcel.eu
|
|
1
|
2100
|
March 23, 2016
|
|
Suitable tool for docking stapled peptide and protein
|
|
1
|
1
|
December 10, 2025
|
|
Need to dock 1000 peptide for one protein in HPC. Is there is any way to do that in one job?
|
|
5
|
19
|
December 8, 2025
|
|
Z-score is zero
|
|
2
|
15
|
November 19, 2025
|
|
Unusual bonds in -OSO3 of ligand after docking
|
|
3
|
15
|
November 14, 2025
|
|
TIP in my pdb file
|
|
2
|
23
|
November 9, 2025
|
|
Haddock Queued for a long time
|
|
0
|
9
|
November 3, 2025
|
|
Docking with protein embedded in a bacterial membrane
|
|
1
|
19
|
October 31, 2025
|
|
Investigating the effect of point mutation in the binding affinity of my protein with a ligand
|
|
6
|
33
|
October 3, 2025
|
|
New User Question- HADDOCK
|
|
39
|
481
|
September 18, 2025
|
|
Parameter file lost
|
|
1
|
6
|
September 7, 2025
|
|
RMSD of docked proteins vs co-crystallized structure from PDB
|
|
4
|
58
|
September 3, 2025
|
|
Error in the topology generation: prot_psf_mol2 could not be created on HPC
|
|
13
|
33
|
August 19, 2025
|
|
PS-HomPPI v2.0 - server error
|
|
0
|
15
|
June 20, 2025
|
|
ERROR_Active residue prediction
|
|
0
|
18
|
June 2, 2025
|
|
Fix multiple occupancies or insertions
|
|
2
|
40
|
April 4, 2025
|
|
Protonated state for HIS
|
|
7
|
79
|
April 3, 2025
|
|
why queued status
|
|
1
|
21
|
March 24, 2025
|
|
Inquiry regarding job queueing and not running
|
|
2
|
52
|
March 19, 2025
|
|
Protein-RNA docking-Optimize run for bioinformatics predictions
|
|
6
|
153
|
March 4, 2025
|
|
PDB-ERROR: Missing residues
|
|
12
|
136
|
February 20, 2025
|
|
CNS installation issue
|
|
3
|
333
|
January 16, 2025
|
|
HADDOCK2.5 waiting for the psf files
|
|
1
|
24
|
January 13, 2025
|
|
Bond length too high
|
|
8
|
67
|
January 2, 2025
|
|
Issues with Job Queue in HADDOCK: Request for Assistance
|
|
3
|
43
|
December 30, 2024
|
|
Invalid literal for int() with base 10: “ ”
|
|
1
|
17
|
December 5, 2024
|
|
Regarding the pmx tutorial
|
|
0
|
20
|
December 5, 2024
|
|
Pmx and gromacs for lprotein-ligand
|
|
0
|
22
|
November 27, 2024
|
|
Pmx protein-ligand tutorial
|
|
0
|
15
|
November 26, 2024
|
|
Getting an error while running
|
|
3
|
25
|
November 23, 2024
|