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HADDOCK3 Docking Results Analysis
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2
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35
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March 22, 2026
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Threshold value
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3
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12
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March 19, 2026
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Running clustfcc across multiple Haddock runs
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3
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14
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March 13, 2026
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HADDOCK3 is taking an excessive amount of time to run
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1
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21
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March 3, 2026
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Extrating Kd with HADDOCK3
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1
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14
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February 26, 2026
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Help creating and using one topology file for multiple non-standard amino acids
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8
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40
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February 12, 2026
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Disulfide bonds: How to add them in HADDOCK 3?
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4
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25
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February 3, 2026
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How to perform blind docking for small ligand?
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2
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75
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January 28, 2026
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Bidentate ligand docking
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2
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44
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November 14, 2025
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HADDOCK2.4 Job Stuck in 'Queued' Status for Several Days - Seeking Assistance
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6
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98
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November 10, 2025
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TIP in my pdb file
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2
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35
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November 9, 2025
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How do I choose the active residues?
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1
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61
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October 30, 2025
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HADDOCK3 Webserver issue when launching Protein-Ligand docking run
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1
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40
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October 25, 2025
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Protein-small molecule-best approach?
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9
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108
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October 4, 2025
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Problem with restraints file in haddock2.4
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1
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37
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September 25, 2025
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Rigid-body step fails with 100% output not generated (tolerance 5%)
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16
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199
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September 22, 2025
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HADDOCK on multi-chain receptor: how to approach?
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3
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118
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September 16, 2025
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Cannot submit “Request elevated access → Guru” on HADDOCK
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2
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42
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September 8, 2025
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Multiple jobs submitted but no email sent
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1
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25
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September 4, 2025
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Error when trying to install CNS make install compiler=gfortran
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5
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74
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August 23, 2025
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Docking with Methyl HMQC CSP data
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2
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28
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August 19, 2025
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UU network down - HADDOCK server not accessible
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0
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32
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August 13, 2025
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About the pair to active/passive selection set numbers
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1
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40
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August 12, 2025
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Results not accessible due to Internal Server Error
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4
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33
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August 11, 2025
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PRODIGY Affinity Scores for Non-native Docking Poses
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3
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62
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August 7, 2025
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The error in the simulated annealing stage of the docking
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5
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53
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August 5, 2025
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Protein docking with two ligands, then confusion regarding the output of pdb file results
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1
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38
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July 31, 2025
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Local haddock 2.5 segmentation error
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2
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58
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July 30, 2025
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Trouble Configuring HADDOCK2.5
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7
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59
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July 20, 2025
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HADDOCK Score Comparison
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2
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67
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July 15, 2025
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