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Why is my substrate changing?
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1
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4
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June 4, 2025
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The refinement of my structure is changing the position of my Mg2+ ion
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1
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6
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June 3, 2025
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Glycan breaks after topoaa
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3
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15
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May 30, 2025
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ERROR: Solvated peptide-protein docking keeps failing
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9
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26
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May 22, 2025
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Non-standard amino acid
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2
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11
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May 21, 2025
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Restraining glycans in a glycosylated protein docking using HADDOCK (locally)
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7
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27
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May 21, 2025
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(@marco.giulini) BioexcelWebinar#85: Modeling antibodies in the post-Alphafold era: Where are we now?
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17
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43
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May 13, 2025
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Variability between HADDOCK runs for protein–DNA docking (wild-type vs mutant comparison)
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5
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27
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May 5, 2025
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How to specify only certain cysteines to form disulfide bonds?
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2
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17
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April 29, 2025
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How to deal with disulfite bond in haddock3?
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0
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11
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April 29, 2025
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Hdock3 scoring for large-scale complex models
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1
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25
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April 11, 2025
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Failure to write antibody-antigen-ambig.tbl
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8
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35
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April 10, 2025
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Queued states stuck using HADDOCK web portal
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5
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34
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April 2, 2025
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Cannot select both chains of MHC II complex for docking
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1
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11
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April 2, 2025
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Disassociation of synthetic amino acid after docking
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1
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11
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April 2, 2025
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Problems with deploying haddock to local operation
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10
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59
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March 24, 2025
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Multi-protein docking with three molecules using HADDOCK
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4
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36
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March 21, 2025
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Carbohydrate not attached to ASN residue during docking
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3
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30
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March 9, 2025
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Protein-RNA docking-Optimize run for bioinformatics predictions
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6
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47
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March 4, 2025
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2 Protein-1 DNA Docking
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1
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40
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January 2, 2025
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Protein-DNA docking and Protein-UV induced DNA docking
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1
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12
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December 31, 2024
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Issues with Job Queue in HADDOCK: Request for Assistance
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3
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21
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December 30, 2024
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Protein and cell membrane docking
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2
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23
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December 26, 2024
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Error in uploading: Request Entity Too Large
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5
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37
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December 18, 2024
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Run.cns-conf file generated instead of run.cns
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1
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27
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December 6, 2024
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HADDOCK score, complex bind energy
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8
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89
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November 27, 2024
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Problem with ligand with same atoms
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2
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25
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November 27, 2024
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Unable to run haddock from docked Cluspro complex
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15
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35
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November 8, 2024
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Error in uploading the PDB file of ligand
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5
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62
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October 22, 2024
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Haddock protocol for docking a protein to another homotrimer
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4
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41
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October 18, 2024
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