community
| Topic | Replies | Views | Activity | |
|---|---|---|---|---|
| Troubleshooting prodigy results |
|
1 | 17 | July 1, 2026 |
| Live runtime statistics |
|
0 | 25 | May 22, 2026 |
| Preserving peptide secondary structure during cyclization/docking |
|
3 | 35 | May 6, 2026 |
| Threshold value |
|
3 | 48 | March 19, 2026 |
| NVT vs NPT for Non-Equilibrium Switching in pmx/GROMACS |
|
1 | 63 | January 26, 2026 |
| Binding affinity and Kd prediction |
|
1 | 115 | November 3, 2025 |
| Rigid-body step fails with 100% output not generated (tolerance 5%) |
|
16 | 271 | September 22, 2025 |
| Cannot select both chains of MHC II complex for docking |
|
1 | 44 | April 2, 2025 |
| Disassociation of synthetic amino acid after docking |
|
1 | 52 | April 2, 2025 |
| PMX Ligand Preparation from Scratch - Atom Types and Parameter Discrepancies |
|
2 | 91 | February 28, 2025 |
| 2 Protein-1 DNA Docking |
|
1 | 95 | January 2, 2025 |
| Protein and cell membrane docking |
|
2 | 61 | December 26, 2024 |
| How to add body restraints in haddock3? |
|
0 | 46 | July 8, 2024 |
| Example for General Feedback |
|
0 | 94 | July 5, 2024 |