Intramolecular interactions

Dear community,

I am trying to optimize orientations of two domains within one protein (AF3 structure) using CSP. Does the webserver allow this without splitting a protein into two?

Comments would be appreciated!

Hanso

The HADDOCK category is meant to discuss any HADDOCK-related issue. For general information about HADDOCK refer to HADDOCK – Bonvin Lab

This won’t work on the server which does require a minimum of two molecules.