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Bidentate ligand docking
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2
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67
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November 14, 2025
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Interpreting a large, highly converged cluster in AIR-guided docking
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1
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47
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November 13, 2025
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Error during protein/DNA docking with mutated nucleotide
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7
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163
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November 13, 2025
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Desolvation-energy
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4
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141
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November 10, 2025
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Question about vizualization of docking protein-DNA (2.4 tutorial / own data)
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4
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144
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November 10, 2025
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Possible Bug in HADDOCK 2.4 Refinement (.json Restraint File)
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1
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49
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November 10, 2025
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HADDOCK2.4 Job Stuck in 'Queued' Status for Several Days - Seeking Assistance
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6
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260
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November 10, 2025
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Help understanding HADDOCK's different refinement methods
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2
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138
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October 30, 2025
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How do I choose the active residues?
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1
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109
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October 30, 2025
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The DNA structure error during Protein-DNA docking
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4
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144
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October 28, 2025
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Multi protein docking on the web server
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1
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64
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October 27, 2025
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Charge of modified lysines after refinement run
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1
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51
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October 25, 2025
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HADDOCK3 Webserver issue when launching Protein-Ligand docking run
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1
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69
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October 25, 2025
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HADDOCK 2.4 server not progressing (0.0% for all stages)
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2
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131
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October 9, 2025
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Access to the full results of Haddock runs
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4
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139
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October 2, 2025
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Haddock 2.4 Vs 3
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3
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158
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September 29, 2025
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Problem with restraints file in haddock2.4
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1
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64
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September 25, 2025
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Something is wrong with the config file
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9
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115
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September 24, 2025
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Rigid-body step fails with 100% output not generated (tolerance 5%)
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16
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378
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September 22, 2025
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Peptide Energy Minimization Prior to Docking
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1
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66
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September 19, 2025
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How to do peptide water refinement/energy minimization before docking
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1
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92
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September 18, 2025
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Usage of cross-link MS-derived distance constraints in HADDOCK 3.0
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4
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90
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September 17, 2025
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HADDOCK on multi-chain receptor: how to approach?
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3
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212
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September 16, 2025
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Cannot submit “Request elevated access → Guru” on HADDOCK
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2
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117
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September 8, 2025
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Guru and Expert privileges
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2
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1083
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September 8, 2025
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O-linked glycosylation
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10
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149
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September 5, 2025
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Multiple jobs submitted but no email sent
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1
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45
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September 4, 2025
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Protein and peptide ligand docking
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5
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161
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September 4, 2025
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ProABC2 - error. log file
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2
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66
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September 3, 2025
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Haddock semi-flexibility?
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2
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76
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September 1, 2025
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