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Do I need to compare a fictional ligand to a known one to assess whether it docks well on the same protein?
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2
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27
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March 12, 2025
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Peptides containing D-aminoacids
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4
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231
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March 12, 2025
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File error in ligand
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4
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36
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March 11, 2025
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Protein-DNA docking with Zn atom
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8
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36
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March 9, 2025
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Carbohydrate not attached to ASN residue during docking
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3
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24
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March 9, 2025
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Anywhere can generate a proper ligand PDB file? ChemDraw file is not working, and rewrite with pymol also not working
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3
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24
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March 7, 2025
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Haddock: S-C bond broken after docking
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4
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36
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February 18, 2025
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Why methylated is not supported? Please help me how to do this?
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1
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15
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February 14, 2025
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Docking cyclic peptides using Ligand PDBs
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3
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176
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February 4, 2025
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Homotetraner docking
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1
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13
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January 27, 2025
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Force binding in "ligand" to only a specific part of the ligand?
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2
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25
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January 2, 2025
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2 Protein-1 DNA Docking
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1
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39
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January 2, 2025
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Protein-DNA docking and Protein-UV induced DNA docking
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1
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12
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December 31, 2024
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Error generating topology for small ligand in HADDOCK 2.4 webserver
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1
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29
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December 29, 2024
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Protein and cell membrane docking
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2
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22
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December 26, 2024
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Error in uploading: Request Entity Too Large
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5
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36
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December 18, 2024
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FCC to assess docking accuracy
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3
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37
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December 18, 2024
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HADDOCK, protein protein docking with one protein with a modified Arginine residue
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11
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67
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December 16, 2024
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Ab-initio warning
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10
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264
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December 12, 2024
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Run.cns-conf file generated instead of run.cns
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1
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27
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December 6, 2024
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Request for Guidance on Analyzing Protein-Protein Docking Results
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7
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121
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December 4, 2024
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HADDOCK score, complex bind energy
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8
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85
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November 27, 2024
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Problem with ligand with same atoms
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2
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24
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November 27, 2024
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Error in the topology generation: prot_psf_mol2 could not be created
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4
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19
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November 23, 2024
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CNS executable not working
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4
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39
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November 22, 2024
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Unable to set number of molecules as 1 on haddock 2.4 web server to run single-molecule mode
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25
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64
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November 22, 2024
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Unable to run haddock from docked Cluspro complex
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15
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34
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November 8, 2024
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protein-DNA binding
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7
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50
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November 7, 2024
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Queued states stuck
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4
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24
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October 31, 2024
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Error in uploading the PDB file of ligand
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5
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57
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October 22, 2024
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