Interpretation of the Haddock results HADDOCK


#1

Is there a list where I can read a description about each result?

HADDOCK score -77.1 +/- 5.1
Cluster size 10
RMSD from the overall lowest-energy structure 4.9 +/- 0.2
Van der Waals energy -36.4 +/- 5.7
Electrostatic energy -302.1 +/- 39.9
Desolvation energy 16.9 +/- 4.0
Restraints violation energy 28.7 +/- 16.09
Buried Surface Area 1052.8 +/- 29.7
Z-Score


#2

Do you mean to understand the meaning of the various terms?

I would refer to our HADDOCK web server papers (Nature Protocol 2010 and JMB 2016) and also consult the online HADDOCK manual pages at http://www.bonvinlab.org/software/haddock2.2/manual/ and refer also to our online tutorials at http://www.bonvinlab.org/education