I am not sure this is the right place to ask, if not please let me know who I can ask.
I am trying to run a script that is used in HADDOCK papers (Information-Driven, Ensemble Flexible Peptide Docking Using HADDOCK) called “build_seq.py” in pymol and I am encountering the following error:
PyMOL>build_seq peptide, QGAADLESLGQ, phi=-60, psi=-40
Building sequence: QGAADLESLGQ
Error: Selection 0: Invalid selection name “_tmp_editor”.
( _tmp_editor and name N )<–
and only the first 4 amino acids are built.
I changed the code to work with Python 3 since I have a newer version of Pymol (changed the print and except syntax)
I’ll really appreciate your help.