Only scoring, not docking

Dear all,

I have multiple protein-DNA complexes and I would like to get their Haddock score, in order to asses their binding. Is it possible?

Best regards,

Simplest thing would be to run them through the refinement interface of HADDOCK.

How many complexes do you have?

Thanks for your reply! I have more than 20000. Can I obtain only the score from the refinement interface of HADDOCK? Wouldn’t it be better if I obtained HADDOCK locally?

That’s a lot!

The server is then not an option…

Thanks! I will obtain the stand alone version.