The HADDOCK category is meant to discuss any HADDOCK-related issue. For general information about HADDOCK refer to http://www.bonvinlab.org/software/haddock2.2
Dear HADDOCK team,
My docking result have given me 8 clusters while there are not many structures in each cluster(from 4 to 16). I noticed there’re only 24% of the water refined models were clustered. Please see below
“HADDOCK clustered 49 structures in 8 cluster(s), which represents 24 % of the water-refined models HADDOCK generated.”
I’m not sure how should I understand this result that I have many structures can’t be clustered. Is this normal? What is this result suggesting? ( I have used the default FCC clustering parameters)
Please let me know your suggestions, I’m sorry if I missed a similar question.