Missing pdb-tools script: pdb_delocc.py?

PDB-tools
1

Hello all, I was following along with the “Tutorial describing the use of a local version of HADDOCK2.4” and noticed at the end of the “Cleaning PDB files prior to docking” section there is mention of a pdb-tool called pdb_delocc.py. However, I can’t seem to find this script in my downloaded version of pdb-tools. Additionally, I don’t see it listed at pdb-tools | A swiss army knife for editing PDB files.. Was this script replaced/renamed by another script in the pdb-tools kit?

2

Yes indeed the tool was renamed to: pdb_selaltloc.py

https://bianca.science.uu.nl/pdbtools/manual#pdb_selaltloc

Will correct the tutorial.

Thanks

1 Like
3

Thank you for the clarification.