I can not submit my job to haddock websever successfully

[amjjbonvin]

You should search first the forum - there are various posts on this topic. See:

Dealing with dimers

Hellow everybody I have problems using Haddock for dimers. I’ve received several different messages: Using pdb (from pdb databse) There was an inconsistency in your data Error message First pdb file contains multiple forms of the same residue. This is not supported in the current form. If you would like to supply multiple conformations, please create an ensemble using a pdb with only one chain (but is a dimer) There was an inconsistency in your data Error message First pdb file contai…

Ab-initio docking of symmetrical homo-multimers

Dear all, we just want to point you to a new online tutorial describing ab-initio docking with symmetry restraints to model homo-multimers.

In short: you will have to renumber your homo-dimer to avoid overalap in residue numbering, give it a unique chainID/segID and use that as input for your docking