I am getting the following error while trying to do protein-protein docking:
There was an inconsistency in your data
Instances of ligand 604 do not contain the same atoms
Directory of the run: http://milou.science.uu.nl/serviceresults/HADDOCK2.2/1981334668/run1
Since only one of the protein contained the residue #604, I checked and it seemed fine. So could someone kindly point me to the error reason?