|
About General Topics in Molecular Dynamics
|
|
0
|
711
|
May 6, 2019
|
|
Missing residues on a protein
|
|
0
|
38
|
April 13, 2026
|
|
Using `martinize2` to get GÅMartini coarse-grained protein parameters (Martini 3)
|
|
0
|
78
|
March 18, 2026
|
|
GROMACS Domain Decomposition Errors in Protein-Membrane Simulation with Martini
|
|
0
|
110
|
March 5, 2025
|
|
RESP for a cofactor
|
|
0
|
214
|
March 22, 2023
|
|
Membrane protein constant pH Amber
|
|
1
|
263
|
January 13, 2023
|
|
RNA structure simulation through Gromacs
|
|
1
|
457
|
January 12, 2023
|
|
Parameterisation of Metallo-protein with amber?
|
|
4
|
488
|
April 30, 2022
|
|
Amber Sander on GPU
|
|
1
|
476
|
April 25, 2022
|
|
Error in loading parameters for tleap
|
|
0
|
789
|
July 13, 2021
|
|
Fatal Error in Ligand
|
|
1
|
1859
|
March 22, 2021
|
|
Cgenff_charmm2gmx error
|
|
0
|
523
|
January 18, 2021
|
|
Visualising Chain B center of mass
|
|
0
|
722
|
January 10, 2021
|
|
Benchmark set suggestions for GROMACS
|
|
0
|
521
|
August 4, 2020
|
|
Effect of using Na or K for MD Simulations
|
|
1
|
635
|
July 5, 2020
|
|
Amber99sb-disp (ff for disordered and ordered proteins)
|
|
0
|
1270
|
June 23, 2020
|
|
Trajectory and Topology files
|
|
0
|
842
|
September 11, 2018
|
|
Follow up on Webinar: "NAFlex, a web server for the study of nucleic acid flexibility" by Federica Battistini (2017-07-20)
|
|
0
|
1100
|
July 18, 2017
|
|
Simulation time for Protein System
|
|
1
|
784
|
May 6, 2019
|