Hello,
Could you please provide me with the BSAtotal, BSAapolar, and BSApolar data for all 144 complexes from the protein-protein complex affinity benchmark version 1.0 of the PRODIGY model dataset? Your dataset currently only includes data for 81 complexes, but I need data for all of them. If you can provide this, please send it to my email: m13564623686@163.com. Thank you very much!
I am afraid we don’t have those at hand but easy to compute using either naccess or freesasa
Hi Sir,
I used Naccess for calculations, but the results are different from yours. I followed the same logic and calculations, so I’m reaching out to you for the data. Alternatively, could you provide me with the specific logic and considerations you used to calculate the BSAtotal, BSAapolar, and BSApolar data with Naccess? This would help me obtain consistent results with yours. Thank you very much.
Hi, sir, I have already obtained the results now. Sorry for the disturbance.