# Missing analysis of Intermolecular Hydrogen Bonds

**URL:** <https://ask.bioexcel.eu/t/missing-analysis-of-intermolecular-hydrogen-bonds/2516>\
**Category:** HADDOCK\
**Created:** [October 18, 2020, 8:11pm UTC](https://ask.bioexcel.eu/t/missing-analysis-of-intermolecular-hydrogen-bonds/2516 "2020-10-18T20:11:46Z")\
**Posts on this page:** 3\
**Page:** 1

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**Author:** ![Kris](https://avatars.discourse-cdn.com/v4/letter/k/82dd89/32.png) [@Kris](https://ask.bioexcel.eu/u/Kris)\
**Post date:** [October 18, 2020, 8:11pm UTC](https://ask.bioexcel.eu/t/missing-analysis-of-intermolecular-hydrogen-bonds/2516/1 "2020-10-18T20:11:46Z")

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Hi community,

I’ve just set up and run my own local docking sim with HADDOCK2.4 and am following the analysis tutorial ([https://www.bonvinlab.org/software/haddock2.2/analysis/#hb](https://www.bonvinlab.org/software/haddock2.2/analysis/#hb)) to see hydrogen bond stats. However, I am missing the analysis of intermolecular hydrogen bonds which is really the key thing I’m looking for.

The ‘_hbonds.disp_’ file is missing from my results. Does anyone know how to create this?

Thanks!

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**Author:** ![amjjbonvin](https://dub1.discourse-cdn.com/flex013/user_avatar/ask.bioexcel.eu/amjjbonvin/32/23_2.png) [@amjjbonvin](https://ask.bioexcel.eu/u/amjjbonvin)\
**Post date:** [October 18, 2020, 8:49pm UTC](https://ask.bioexcel.eu/t/missing-analysis-of-intermolecular-hydrogen-bonds/2516/2 "2020-10-18T20:49:05Z")

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Check the 2.4 manual

[https://www.bonvinlab.org/software/haddock2.4/run/#analysis-and-clustering](https://www.bonvinlab.org/software/haddock2.4/run/#analysis-and-clustering)

You need to define full analysis in run.cns to get those files

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<div class="post-metadata">

**Author:** ![Kris](https://avatars.discourse-cdn.com/v4/letter/k/82dd89/32.png) [@Kris](https://ask.bioexcel.eu/u/Kris)\
**Post date:** [October 19, 2020, 10:57am UTC](https://ask.bioexcel.eu/t/missing-analysis-of-intermolecular-hydrogen-bonds/2516/3 "2020-10-19T10:57:30Z")

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Brilliant! So simple, thanks!
