# Hydrogen Bonds in Protein Docking

**URL:** <https://ask.bioexcel.eu/t/hydrogen-bonds-in-protein-docking/1758>\
**Category:** Uncategorized\
**Created:** [December 2, 2019, 4:28am UTC](https://ask.bioexcel.eu/t/hydrogen-bonds-in-protein-docking/1758 "2019-12-02T04:28:36Z")\
**Posts on this page:** 2\
**Page:** 1

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**Author:** ![NADIAH](https://avatars.discourse-cdn.com/v4/letter/n/90ced4/32.png) [@NADIAH](https://ask.bioexcel.eu/u/NADIAH)\
**Post date:** [December 2, 2019, 4:28am UTC](https://ask.bioexcel.eu/t/hydrogen-bonds-in-protein-docking/1758/1 "2019-12-02T04:28:36Z")

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Hi, prof. I want ask, how to see hydrogen bonds in intermolecular of protein docking from HADDOCK? There is any software in this server that I can use?

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**Author:** ![amjjbonvin](https://dub1.discourse-cdn.com/flex013/user_avatar/ask.bioexcel.eu/amjjbonvin/32/23_2.png) [@amjjbonvin](https://ask.bioexcel.eu/u/amjjbonvin)\
**Post date:** [December 2, 2019, 12:41pm UTC](https://ask.bioexcel.eu/t/hydrogen-bonds-in-protein-docking/1758/2 "2019-12-02T12:41:59Z")

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The server does not report the hydrogen bonds. But there is plenty of software that will do it from the PDB files you can download. A google search will return several options.