# CPORT results in an error and no output

**URL:** <https://ask.bioexcel.eu/t/cport-results-in-an-error-and-no-output/2458>\
**Category:** HADDOCK\
**Created:** [September 23, 2020, 11:36am UTC](https://ask.bioexcel.eu/t/cport-results-in-an-error-and-no-output/2458 "2020-09-23T11:36:04Z")\
**Posts on this page:** 3\
**Page:** 1

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**Author:** ![rscheltema](https://dub1.discourse-cdn.com/flex013/user_avatar/ask.bioexcel.eu/rscheltema/32/320_2.png) [@rscheltema](https://ask.bioexcel.eu/u/rscheltema)\
**Post date:** [September 23, 2020, 11:36am UTC](https://ask.bioexcel.eu/t/cport-results-in-an-error-and-no-output/2458/1 "2020-09-23T11:36:04Z")

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Hi all,

I’m running the CPORT analyses to prepare for the HADDOCK runs. For one of my structures I get an error and no active/passive residues (hopefully because of the error :)). The details are below

[https://alcazar.science.uu.nl/serviceresults/CPORT/48432899/index.html](https://alcazar.science.uu.nl/serviceresults/CPORT/48432899/index.html)

It looks like the BLAST search crashes? Could this be due to a mistake in the PDB file? It was generated in two parts by trRosetta and ‘fused’ in pymol, but the sequence is correct.

Looking forward to the answer 🙂

Cheers,  
Richard

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**Author:** ![amjjbonvin](https://dub1.discourse-cdn.com/flex013/user_avatar/ask.bioexcel.eu/amjjbonvin/32/23_2.png) [@amjjbonvin](https://ask.bioexcel.eu/u/amjjbonvin)\
**Post date:** [September 23, 2020, 12:33pm UTC](https://ask.bioexcel.eu/t/cport-results-in-an-error-and-no-output/2458/2 "2020-09-23T12:33:39Z")

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Considering that pretty much all servers fail, there must be a problem with your PDB file most likely.

Without it, difficult to say what the issue is.

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**Author:** ![rscheltema](https://dub1.discourse-cdn.com/flex013/user_avatar/ask.bioexcel.eu/rscheltema/32/320_2.png) [@rscheltema](https://ask.bioexcel.eu/u/rscheltema)\
**Post date:** [September 23, 2020, 2:35pm UTC](https://ask.bioexcel.eu/t/cport-results-in-an-error-and-no-output/2458/3 "2020-09-23T14:35:16Z")

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Okay, will investigate if i can find anything!  
Thanks for the prompt response 🙂
