# 100% of generated clusters clustered

**URL:** <https://ask.bioexcel.eu/t/100-of-generated-clusters-clustered/3716>\
**Category:** Uncategorized\
**Created:** [May 6, 2022, 8:14am UTC](https://ask.bioexcel.eu/t/100-of-generated-clusters-clustered/3716 "2022-05-06T08:14:17Z")\
**Posts on this page:** 2\
**Page:** 1

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**Author:** ![Fredrik](https://avatars.discourse-cdn.com/v4/letter/f/cab0a1/32.png) [@Fredrik](https://ask.bioexcel.eu/u/Fredrik)\
**Post date:** [May 6, 2022, 8:14am UTC](https://ask.bioexcel.eu/t/100-of-generated-clusters-clustered/3716/1 "2022-05-06T08:14:17Z")

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Hi,

I have performed a protein-protein docking with 3 molecules which generated a successful output. However, no clusters were generated with the default parameters and the minimum cluster size went from 4 to 1. This resulted in 100% of the clusters being clustered. This seem quite puzzling to me, can I be confident in these results?

Screen capture:

 ![image](https://europe1.discourse-cdn.com/flex013/uploads/bioexcel/original/1X/60dea9e75e615d763df16ac0511dd6beecdd316d.png)

Thankful for any comments or suggestions.  
Cheers,  
Fredrik

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**Author:** ![amjjbonvin](https://dub1.discourse-cdn.com/flex013/user_avatar/ask.bioexcel.eu/amjjbonvin/32/23_2.png) [@amjjbonvin](https://ask.bioexcel.eu/u/amjjbonvin)\
**Post date:** [May 6, 2022, 9:10am UTC](https://ask.bioexcel.eu/t/100-of-generated-clusters-clustered/3716/2 "2022-05-06T09:10:38Z")

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It basically tells you that no clusters were generated.

What you are effectively getting is a single structure ranking.

It all depends on what kind of information if any you used in the docking, and also how many molecules you docked.